9 changed files with 39 additions and 139 deletions
-
21TikZ_tests/loop.tikz
-
BINTikZ_tests/operational_loop.pdf
-
73TikZ_tests/operational_loop.tex
-
BINTikZ_tests/stackexchange_2.pdf
-
34TikZ_tests/stackexchange_2.tex
-
10TikZ_tests/style.tikzstyles
-
BINmain.pdf
-
2main.tex
-
38readme.md
@ -1,21 +0,0 @@ |
|||
\begin{tikzpicture} |
|||
\begin{pgfonlayer}{nodelayer} |
|||
\node [style=circle] (0) at (-5, 5) {Simulations}; |
|||
\node [style=circle] (1) at (5, 5) {Curves}; |
|||
\node [style=circle] (3) at (-5, -5) {Data}; |
|||
\node [style=circle] (4) at (5, -5) {}; |
|||
\node [style=circle] (5) at (0, 0) {SARS-CoV-2}; |
|||
\node [style=circle] (6) at (11, 0) {}; |
|||
\node [style=circle] (7) at (11, 0) {}; |
|||
\node [style=circle] (8) at (11, 0) {Bodies}; |
|||
\end{pgfonlayer} |
|||
\begin{pgfonlayer}{edgelayer} |
|||
\draw [style=edge] (3) to (0); |
|||
\draw [style=edge] (0) to (1); |
|||
\draw [style=edge, in=90, out=15, loop] (1) to (); |
|||
\draw [style=edge] (1) to (4); |
|||
\draw [style=edge] (4) to (3); |
|||
\draw (5) to (8); |
|||
\draw [style=edge, in=180, out=90, loop] (0) to (); |
|||
\end{pgfonlayer} |
|||
\end{tikzpicture} |
|||
@ -1,73 +0,0 @@ |
|||
% from this example https://tex.stackexchange.com/questions/305375/how-to-position-labels-at-edges-of-tikz-figures/305391 |
|||
|
|||
\documentclass{article} |
|||
\usepackage{tikz} |
|||
\usetikzlibrary{arrows.meta,positioning} |
|||
|
|||
\usepackage{geometry} |
|||
\geometry{a4paper, landscape, margin=1cm} |
|||
\pagenumbering{gobble} |
|||
|
|||
\setlength\parindent{0pt} |
|||
|
|||
\begin{document} |
|||
|
|||
{\huge Operational loop of COVID-19}\\ |
|||
\\ |
|||
David Benqu\'e\\ |
|||
\color{red} |
|||
Work in Progress: \today |
|||
\color{black} |
|||
\vspace{3\baselineskip} |
|||
% \section*{Operational loop of COVID-19} |
|||
|
|||
|
|||
\begin{tikzpicture}[>={Stealth[scale=2]}, % arrow head |
|||
shorten > = 3pt, |
|||
node distance = 5cm and 4cm, |
|||
el/.style = {inner sep=5pt, font=\normalsize, align=center, sloped}, |
|||
state/.style = {minimum size=2.5cm, circle, draw=black, fill=white}, %node styles |
|||
sub/.style = {rectangle, xshift=2.5cm} |
|||
% every label/.append style = {font=\tiny}, unused node labels |
|||
] |
|||
|
|||
\node (simulations) [state, align=center] {Models\\\&\\Simulations}; |
|||
\node (data) [state, right=of simulations] {Data}; |
|||
\node (virus) [state, left=of simulations, yshift=-3.7cm] {SARS-CoV-2}; |
|||
\node (curves) [state,below=of simulations] {Curves}; |
|||
\node (policy) [state,below=of data, align=center] {Policy\\Interventions}; |
|||
\node (bodies) [state, right=of policy, yshift=3.7cm] {Populations}; |
|||
\node (futures1) [sub, left=of simulations,yshift=0.7cm] {Thousands}; |
|||
\node (futures2) [sub, left=of simulations] {of}; |
|||
\node (futures3) [sub, left=of simulations, yshift=-0.7cm] {Futures}; |
|||
|
|||
|
|||
\path[->] |
|||
(simulations) edge [in=110,out=70,max distance=1.5cm,loop] node[el,above] {Runs and re-runs} (simulations) |
|||
(virus) edge [in=110,out=70,max distance=1.5cm,loop] node[el, above] {Mutates} (virus) |
|||
(virus) edge [bend left=5] node[el, above, pos=0.15] {Infects} (bodies) |
|||
(bodies) edge [bend left=5] node[el, below, pos=0.15] {Antibodies} (virus) |
|||
(bodies) edge [bend right=10] node [el, above] {Counted} (data) |
|||
(data) edge [bend right=10] node[el,above] {Basis for} (simulations) |
|||
(simulations) edge [bend right=10] node[el, below] {Produce more\\Look like} (data) |
|||
(simulations) edge [bend right=10] node[el, below] {Represented as} (curves) |
|||
(data) edge [bend left=10] node[el, below, pos=0.2] {Represented as} (curves) |
|||
(policy) edge [bend left=10] node[el, below, pos=0.2] {Assessed with} (simulations) |
|||
(simulations) edge [bend left=10] node[el, above, pos=0.3] {Basis for} (policy) |
|||
(policy) edge [bend right=10] node[el, below] {Constrain} (bodies) |
|||
(policy) edge [bend right=10] node[el, below] {What gets counted} (data) |
|||
(curves) edge [bend right=10] node[el, below] {Legitimise} (policy) |
|||
(curves) edge [bend left=10] node[el, below] {Produce as shape\\e.g. waves, peaks, etc} (virus) |
|||
(simulations) edge [] node [el] {} (futures1) |
|||
(simulations) edge [] node [el] {} (futures2) |
|||
(simulations) edge [] node [el] {} (futures3); |
|||
|
|||
\end{tikzpicture} |
|||
|
|||
\vspace{3\baselineskip} |
|||
|
|||
Inspired by:\\ |
|||
Dinno, Alexis. 2007. `Loop Analysis of Causal Feedback in Epidemiology: An Illustration Relating to Urban Neighborhoods and Resident Depressive Experiences`. \emph{Social Science \& Medicine} 65 (10): 2043–57. https://doi.org/10.1016/j.socscimed.2007.06.018. |
|||
|
|||
\end{document} |
|||
|
|||
@ -1,34 +0,0 @@ |
|||
\documentclass{article} |
|||
\usepackage{tikz} |
|||
|
|||
\usetikzlibrary{arrows} |
|||
|
|||
\tikzset{ |
|||
vertex/.style={circle,draw,minimum size=1.5em}, |
|||
edge/.style={->,> = latex'} |
|||
} |
|||
|
|||
\begin{document} |
|||
\begin{tikzpicture} |
|||
|
|||
% vertices |
|||
\node[vertex] (1) at (0,0) {$1$}; |
|||
\node[vertex] (2) at (2,0) {$2$}; |
|||
\node[vertex] (3) at (0,-2) {$3$}; |
|||
\node[vertex] (4) at (2,-2) {$4$}; |
|||
\node[vertex] (5) at (-2,-2) {$5$}; |
|||
|
|||
%edges |
|||
\draw[edge] (1) -- (2) node[midway, above] {$\frac{1}{3}$}; |
|||
\draw[edge] (1.260) -- (3.100); |
|||
\draw[edge] (1.325) -- (4.125) node[pos=.3, right, sloped, rotate=90] {$\frac{1}{3}$}; |
|||
\draw[edge] (2) -- (3); |
|||
\draw[edge] (2) -- (4) node[midway, right] {$\frac{1}{2}$}; |
|||
\draw[edge] (3.80) -- (1.280); |
|||
\draw[edge] (4) -- (3); |
|||
\draw[edge] (4.145) -- (1.305); |
|||
\draw[edge] (3.170) -- (5.10); |
|||
\draw[edge] (5.350) -- (3.190); |
|||
|
|||
\end{tikzpicture} |
|||
\end{document} |
|||
@ -1,10 +0,0 @@ |
|||
% TiKZ style file generated by TikZiT. You may edit this file manually, |
|||
% but some things (e.g. comments) may be overwritten. To be readable in |
|||
% TikZiT, the only non-comment lines must be of the form: |
|||
% \tikzstyle{NAME}=[PROPERTY LIST] |
|||
|
|||
% Node styles |
|||
\tikzstyle{circle}=[fill=white, draw=black, shape=circle, minimum size=2cm] |
|||
|
|||
% Edge styles |
|||
\tikzstyle{edge}=[->, >=latex] |
|||
@ -0,0 +1,38 @@ |
|||
# Operational Loops of COVID-19 |
|||
|
|||
Diagrams commissioned by Jussi Parikka and Tony D. Sampson for their paper: |
|||
|
|||
T. D. Sampson and J. Parikka. The Operational Loops of a Pandemic.*Cultural Politics*, 17(1):55–68, Mar. 2021. ISSN1743-2197. [doi: 10.1215/17432197-8797529](https://read.dukeupress.edu/cultural-politics/article-abstract/17/1/55/172811/The-Operational-Loops-of-a-Pandemic) |
|||
|
|||
## Structure |
|||
|
|||
[main.tex](main.tex) is the main file that produces LaTeX output as a PDF in [main.pdf](main.pdf). It imports the diagrams from their respective folders. |
|||
|
|||
### Loop 1: Scalar logics |
|||
|
|||
Found the [scalar_logics](scalar_logics/) folder. |
|||
|
|||
SVG file drawn with Inkscape with text formatted by LaTeX following [Gilles Castel's method](https://castel.dev/post/lecture-notes-2/). |
|||
|
|||
|
|||
### Loop 2: Phase portrait diagram |
|||
|
|||
Found in the [tornado](tornado/) folder. |
|||
|
|||
Data visualisation in Python. Reproducing this graph requires installing the Python dependencies listed in [pyproject.toml](pyproject.toml). With [Poetry](https://python-poetry.org/) installed, run the following from the root of this repository: |
|||
|
|||
```bash |
|||
poetry install |
|||
``` |
|||
|
|||
### Loop 3: Model Operations |
|||
|
|||
Found in the [futures_loop](futures_loop/) folder. |
|||
|
|||
Diagram drawn in LaTeX / TikZ. This diagram was not included in the Sampson & Parikka paper. |
|||
|
|||
### Loop 4: Pandemic Wave |
|||
|
|||
Found in the [wave_loop](wave_loop/) folder. |
|||
|
|||
Diagram drawn in LaTeX / TikZ. This diagram was not included in the Sampson & Parikka paper. |
|||
Write
Preview
Loading…
Cancel
Save
Reference in new issue